Multichannel Acquisition Processor (MAP)
The Plexon Multichannel Acquisition Processor (MAP) sets the standard for programmable amplification, filtering, and real-time spike sorting of multi-electrode signals acquired in neurophysiological research.
The Plexon Multichannel Acquisition Processor (MAP) sets the standard for programmable amplification, filtering, and real-time spike sorting of multi-electrode signals acquired in neurophysiological research.
The Plexon Multichannel Acquisition Processor (MAP) sets the standard for programmable amplification, filtering, and real-time spike sorting of multi-electrode signals acquired in neurophysiological research.
The MAP is a modular system of plug-in circuit boards that are mounted in a stand-alone box. This unique architecture results in a robust and reliable system that is easily scalable in capacities of 16, 32, 48, 64, 80, 96 and 128 channels. Upgrade boards- including signal boards, DSP boards, digital input boards, digital output boards, and host link boards- are also available. The MAP system can also record up to 64 continuous analog signals at 40 KHz using National Instruments Data Acquisition (NI DAQ) devices. For example these signals can be field potentials, eye position, or blood pressure. The analog channel count is dependent upon the acquisition speed. Decreasing the acquisition speed to 10 KHz increases the channel count to 256 channels.
A powerful component of the MAP system is the Plexon MAP Control Software, or Real-Time Acquisition System Programs for Unit Timing in Neuroscience (RASPUTIN), a suite of client/server programs that control spike sorting in the MAP and provide real-time data visualization and analysis. The RASPUTIN program records spike, digital-event data, and analog signals in to a single data file.

RASPUTIN is a suite of applications for control, visualization, and data analysis. RASPUTIN's primary application/user interface is Sort Client. Sort Client visualizes, analyzes, and records spike waveforms that have been filtered and sorted by the MAP. The main window of Sort Client, shown at the right, displays the waveforms in several different views to facilitate detection and classification of spikes. One method the MAP uses to identify neurons is displaying waveforms as data points in three-dimensional principal component analysis (PCA) space.
As shown in the close up view of the 3D Cluster Display at the lower right, a cluster of points, which represents an individual spike, can be easily selected by drawing a boundary around it, which then establishes a template that is sent back to the MAP for real-time sorting.

Additional RASPUTIN Applications In addition to Sort Client, RASPUTIN includes the clients in the table below, all of which provide on-line functionality.
| Additional RASPUTIN Clients | |
| REF2 | Tool for configuring MAP and preamplifiers |
| Graphical Activity Client | Strip-chart display for monitoring spike activity or continuous waveforms |
| Grid Monitor Client | Display of spike-rate activity as an animated color grid |
| PeriEvent Client | Display of histograms and perievent rasters |
| PlexNet | Real-time broadcast of MAP data to other computers within a TCP/IP (Ethernet) network |
| Tuning Curve Client | Real-time tuning curve plots firing rates around user-identified events |
| Client Development Kit | API and sample code for developing custom applications in C/C++ or MATLAB |
Older customers will often call the big silver acquisition machine a “Harvey Box”, since they associate the data processor with its inventor, Harvey Wiggins. Nowadays we typically call it the MAP box.
Plexon is always willing to help interface third party hardware to our own. Our design engineers are able to build custom parts, but the lead time is often long since the man hours involved with prototyping and testing can be extensive. We provide pin diagrams and voltage requirement information on our website if you are looking to do it yourself.
If you have to reinstall the NI cards (on a new computer, or after wiping the hard drive), then there are several important steps to take. Download the Traditional NI-DAQ (Legacy) Version 7.4.1 here - http://digital.ni.com/softlib.nsf/websearch/3DBF3D343476A28F8625709E006A4937
You will have to register on the NI website to do this, but it’s a quick process. The download is a 400 megabyte .zip file, so make sure you have the space and time. After downloading, unzip the file to a directory you’ll remember. The most important step is that you have to REMOVE the NI cards from the computer BEFORE installing the drivers. Power down the computer and remove the cards. Power on, and then install the drivers. Power down again, replace the cards in their original location, and then power on. Windows will recognize the cards, and locate the drivers automatically.
PBX preamps have 1-pole filtering on both the upper and lower bandpass. PBX2 preamps have 2-pole filtering on the low-cutoff (high-pass) side, and 4-pole filtering on the high-cutoff (low-pass) side. Only the PBX preamp has the programmable referencing option, as controlled by the REF2 software. This is identified by the “-r” in the preamp description, such as PBX/32sp-r/16fp. The “-r” at the end of the spike board description means that programmable referencing is available on the spike boards.
The BNC connector labeled “SPK” outputs the spike signal from the channel selected in SortClient’s multi-channel display. This is useful for viewing the spike channel in an oscilloscope, or hearing the output on a speaker.
There are two ways to do this. The first way is quick and easy, but limited. On the TIM board is a BNC plug called EVT. This will output a TTL pulse on a threshold crossing of the currently selected unit in SortClient. Obviously, this is limited because it’s only going to be for the one unit you have selected. The second way involves the Digital Out (DOUT) sub board on the DSP boards. Each DOUT can give a pulse for eight channels for two units per channel. The channel numbers it can output depend on where the DOUT is physically located. Top most slot is channels 1-8, next one down is 9-16, and so on. If you want to add DOUT boards to your MAP system, contact Plexon for a quote.
I recommend using something like CamStudio (http://www.camstudio.org/), or any other open source, low computational overhead desktop capture program.
If you’re having hardware problems with a MAP system, then we will always want you to use a headstage tester unit along with the test .wav file located here - TestSpike&FPdata-1min.wav
Connect the audio cable and the headstage to the tester board, and the headstage to the preamp with headstage cable. The audio file is played from the computer to the headstage tester where is passes through resistors to normal spike levels. Then you’ll be able to see simulated spikes going through the headstage and preamp to the MAP box. Once you have this baseline, we can start solving problems.
| MAP/16 | Standard configuration MAP hardware, 16 channels | |
| PBX3/16sp-r-G1000 | Preamplifier box with 16 spike channels (150Hz - 8kHz, 1 pole low-cut, 3 pole high-cut, with programmable referencing, 1000x gain) | |
| CBL/PBX16-15L | Data cable for 16 preamplifier channels, 15 ft. length | |
| HST/8o50-G1-GR | 8-channel Omnetics .050 [10-pin] headstage, gain 1x, grounded reference | |
| HSC/8 | 8-channel headstage cable, 36" length | |
| HTU/8o50 | Headstage tester unit, 8-channel Omnetics .050 | |
| MCP/16 | 16-channel MAP system control program software (RASPUTIN, Offline Sorter, WaveTracker, and all utilities), 2 OFS keys (USB), and 1 USB MAP key | |
| NEX/v4-3usb | NeuroExplorer Data Analysis software, version 4 with manual, three-seat license (3USB keys) | |
| DELL/WS-T3400 | Dell Precision T3400 Workstation, 3.33GHz Core 2 Duo processor, 500GB hard drive, 4GB RAM, DVD/CD-RW, Windows XP | |
| MON/22LCD-W | 22" wide-aspect flat panel LCD monitor | |
| TDS2002B | Tektronic 2-channel digital oscilloscope, with color LCD display | |
| INS | On-site installation and training - domestic | |
| CRT | Crating and handling | |
| MAP/32 | Standard configuration MAP hardware, 32-channels |
| PBX3/32-sp-r-G50/32fp-G50 | Preamplifier box with 32 spike channels (150Hz - 8kHz, 1 pole low-cut, 3 pole high-cut, with programmable referencing, 50x gain) and 32 field potential channels (0.07, 0.7, 3Hz - 170, 300, 500Hz user selectable, 1 pole low-cut, 1 pole high-cut, 50x) |
| CBL/PBX-16-15L | Data cable for 16 preamplifier channels, 15 ft. length |
| HST/32V-G20 | 32-channel VLSI headstage, gain 20x |
| HSC/32V-long-96L | Headstage cable, 36 gauge, for 32-channel VLSI headstage, 96" length |
| HTU/32V | Headstage tester unit for 32-channel VLSI headstage |
| COM/32m-H | 32-channel motoized commutator with Hall Effect sensor, stepper motor and Harwin connectors (for passing 32 signal channels plus headstage reference, ground and power channels) |
| ADC/64c-PCI-12B-1-C | National Instruments A/D subsystem plus accessories (C-HUB, 2 meter CBL/C-HUB cable, and PCI-6071e A/D board) for 64-channel analog recording (1.25MS/sec, 12-bit resolution) |
| BNC/16-B | Panel with 16 BNC connectors, 34-pin header, 37-pin D-sub connector, includes jumpers for individual channel selection input |
| CBL/BNC-16B | Cable to connect BNC/16-B to C-HUB |
| CBL/DI-BW-15L | Digital input cable, bare wire (no connector) at distal end, 15 ft. length |
| MCP/32 | 32-channel MAP system control program software (RASPUTIN, Offline Sorter, WaveTracker, and all utilities), 2 OFS keys (USB), and 1 MAP key (USB) |
| DELL/WS-T3400 | Dell Precision T3400 Workstation, 3.33GHz Core 2 Duo processor, 500GB hard drive, 4GB RAM, DVD/CD-RW, Windows XP |
| MON/22LCD-W | 22" wide-aspect flat panel LCD monitor |
| TDS2002B | Tektronix 2-channel digital oscilloscope, with color LCD display |
| INS | On-site installation and training - domestic |
| CRT | Crating and handling |